yosuken

bioinformatics / microbiology

JAMSTECTokyo

Pinned Repositories

ccfind
ccfind - circular complete genome finder with clues of terminal redundancy
Language:Ruby15 3 32
CountMappedReads
an in-house script for FPKM calculation
Language:Shell00
CountMappedReads2
a tool for NGS read mapping, count reads and calculate normalized abundance
Language:Ruby0 1 00
HHliner
00
MAGRE
Language:Ruby12 2 00
match_inchi
Language:Ruby0 1 00
SDsearch
SDsearch - a helper tool for high sensitive HMM-HMM search against domain DBs (e.g. Pfam)
Language:Ruby60
ViPTreeGen
a command line tool for viral proteomic tree generation, part of the ViPTree project: http://www.genome.jp/viptree
Language:Ruby25 2 85

yosuken's Repositories

yosuken/ViPTreeGen
a command line tool for viral proteomic tree generation, part of the ViPTree project: http://www.genome.jp/viptree
Language:Ruby25 2 85
yosuken/ccfind
ccfind - circular complete genome finder with clues of terminal redundancy
Language:Ruby15 3 32
yosuken/MAGRE
Language:Ruby12 2 00
yosuken/SDsearch
SDsearch - a helper tool for high sensitive HMM-HMM search against domain DBs (e.g. Pfam)
Language:Ruby60
yosuken/CountMappedReads
an in-house script for FPKM calculation
Language:Shell00
yosuken/CountMappedReads2
a tool for NGS read mapping, count reads and calculate normalized abundance
Language:Ruby0 1 00
yosuken/HHliner
00
yosuken/match_inchi
Language:Ruby0 1 00