ysbioinfo

A bioinformatics investigator focused on immuno-oncology

Pinned Repositories

GeneNMF
Methods to discover gene programs on single-cell data
Language:R90 2 194
BICSEQ2
BICSEQ2 pipeline for processing CPTAC3 somatic WGS CNA
Language:Shell16 18 65
BIC-seq2-mappability-files
BIC-seq2 only provides mappability files for hg18 and hg19, with no support for 150bp reads. This repository provides 150mer mappability files for both hg19 and hg38
Language:Shell1 1 00
LOHHLA-SS
A modified version of LOHHLA for Single Sample analysis
Language:R1 2 00
NeoSV
A computational workflow to identify neoantigens from structural variations (SVs)
Language:Python8 1 31

ysbioinfo's Repositories

ysbioinfo/NeoSV
A computational workflow to identify neoantigens from structural variations (SVs)
Language:Python8 1 31
ysbioinfo/BIC-seq2-mappability-files
BIC-seq2 only provides mappability files for hg18 and hg19, with no support for 150bp reads. This repository provides 150mer mappability files for both hg19 and hg38
Language:Shell1 1 00
ysbioinfo/LOHHLA-SS
A modified version of LOHHLA for Single Sample analysis
Language:R1 2 00