Mitochondria Segmentation from EM Images via Hierarchical Structured Contextual Forest
This project contains the code used for the experiments in the paper: "Mitochondria segmentation from EM images via hierarchical structured contextual forest." in JBHI, by Jialin Peng and Zhimin Yuan.
You can run this code on Linux or Windows.
Contact: Zhimin Yuan (zhimin_yuan@163.com)
The final segmentation result of our 3D segmentation framework is also contained. Please open the 'pro.mat' in Matlab.
The other code and segmentation result(Hierarchical multi-view fusion: a pseudo 3D variant) will be released soon.
If you find this work or code is helpful in your research, please cite:
@ARTICLE{8939446, author={J. {Peng} and Z. {Yuan}}, journal={IEEE Journal of Biomedical and Health Informatics}, title={Mitochondria segmentation from EM images via hierarchical structured contextual forest}, year={2019}, volume={}, number={}, pages={1-1}, keywords={Segmentation;electron microscopy image;contextual features;hierarchical learning;multi-view fusion}, doi={10.1109/JBHI.2019.2961792}, ISSN={2168-2208}, month={},}