Pinned Repositories
auto-sphinx-page-action
GitHub action that creates website using Sphinx.
bcell
A framework for linear B-cell epitope prediction and classification. (ECML PKDD 2023)
complex_systems
A Python package for studying complex systems.
config-argument-parser
A package to help automatically create command-line interface from configuration or code.
genome_analysis
Genome analysis labs.
phasty
A Python interface for PHAST (phylogenetic analysis with space/time models).
py-cdhit
A Python package for CD-HIT, clustering protein or nucleotide sequences.
vae-mixin-pytorch
Variational autoencoders as mixins.
yuanx749's Repositories
yuanx749/py-cdhit
A Python package for CD-HIT, clustering protein or nucleotide sequences.
yuanx749/config-argument-parser
A package to help automatically create command-line interface from configuration or code.
yuanx749/auto-sphinx-page-action
GitHub action that creates website using Sphinx.
yuanx749/complex_systems
A Python package for studying complex systems.
yuanx749/docker-flask-redis-celery
Docker Compose template for web application.
yuanx749/phasty
A Python interface for PHAST (phylogenetic analysis with space/time models).
yuanx749/2048-ai-tk
2048 AI in Python with GUI.
yuanx749/bcell
A framework for linear B-cell epitope prediction and classification. (ECML PKDD 2023)
yuanx749/deep-vaccine
Predict multi-epitope vaccine subunit candidates using NLP.
yuanx749/genome_analysis
Genome analysis labs.
yuanx749/vae-mixin-pytorch
Variational autoencoders as mixins.
yuanx749/config-argument-parser-docs
Docs of config-argument-parser.
yuanx749/master-thesis
The code for my master's degree project.
yuanx749/matplotlib
matplotlib: plotting with Python
yuanx749/n-body
N-body simulation with quadtree, OpenMP parallelized.
yuanx749/numpy
The fundamental package for scientific computing with Python.
yuanx749/pandas
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
yuanx749/pyprobml
Python code for "Probabilistic Machine learning" book by Kevin Murphy
yuanx749/pytorch
Tensors and Dynamic neural networks in Python with strong GPU acceleration
yuanx749/pytorch_geometric
Graph Neural Network Library for PyTorch
yuanx749/repositories-list
A list of my public repos.
yuanx749/scanpy
Single-cell analysis in Python. Scales to >1M cells.
yuanx749/scikit-learn
scikit-learn: machine learning in Python
yuanx749/scipy
SciPy library main repository
yuanx749/shap
A game theoretic approach to explain the output of any machine learning model.
yuanx749/transformers
🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.
yuanx749/yuanx749
yuanx749/yuanx749.github.io