yuehuang-gh

GCN-on-Molecular-Subtype

GCN_Cancer

GREMI

MOGONET

MOGONET (Multi-Omics Graph cOnvolutional NETworks) is a novel multi-omics data integrative analysis framework for classification tasks in biomedical applications.

MPK-GNN

Graph Neural Networks with Multiple Prior Knowledge for Multi-Omics Data Analysis

mprod_package

Software implementation for tensor-tensor m-product

multiomics-network-inference

Code used for the manuscript 'Network reconstruction for trans acting genetic loci using multi-omics data and prior information' by Hawe et al., 2022 in Genome Medicine

netOmics

Multi-omics multi-layered network integration and interpretation

PALMO

Identify Intra-, Inter-donor variations in bulk or single cell longitudinal dataset

tcam_analysis_notebooks

This repository contains python notebooks with code used for the analysis showed in the TCAM paper

yuehuang-gh/GCN-on-Molecular-Subtype

yuehuang-gh/GCN_Cancer

yuehuang-gh/GREMI

yuehuang-gh/MOGONET

MOGONET (Multi-Omics Graph cOnvolutional NETworks) is a novel multi-omics data integrative analysis framework for classification tasks in biomedical applications.

yuehuang-gh/MPK-GNN

Graph Neural Networks with Multiple Prior Knowledge for Multi-Omics Data Analysis

yuehuang-gh/mprod_package

Software implementation for tensor-tensor m-product

yuehuang-gh/multiomics-network-inference

Code used for the manuscript 'Network reconstruction for trans acting genetic loci using multi-omics data and prior information' by Hawe et al., 2022 in Genome Medicine

yuehuang-gh/netOmics

Multi-omics multi-layered network integration and interpretation

yuehuang-gh/PALMO

Identify Intra-, Inter-donor variations in bulk or single cell longitudinal dataset

yuehuang-gh/tcam_analysis_notebooks

This repository contains python notebooks with code used for the analysis showed in the TCAM paper

yuehuang-gh/R4HPC

Course materials for OLCF/CADES/ALCF/NERSC tutorial for Using R on Cluster Computers

yuehuang-gh/UKB_RAP

Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DNAnexus webinars, online trainings and workshops.

yuehuang-gh/ukbpheno