A simple download tool to download .sra
file from a repository of INSDC members.
Because we are living far away from Maryland. download-sra
can choose a repository to be used.
wget
curl
jq
$ download-sra SRR000001
$ download-sra SRR000001 NCBI
$ download-sra SRR000001 EBI
$ download-sra SRR000001 DDBJ
Available on Quay.io
$ docker run --rm -it -v $(pwd):/work -w /work quay.io/inutano/download-sra:0.1.2 download-sra "DRR000001" "NCBI"
$ docker run --rm -it -v $(pwd):/work -w /work quay.io/inutano/download-sra:0.1.2 download-sra "DRR000001" "EBI"
$ docker run --rm -it -v $(pwd):/work -w /work quay.io/inutano/download-sra:0.1.2 download-sra "DRR000001" "DDBJ"