About the max length of simulated HIFI read
11malong opened this issue · 2 comments
11malong commented
For HIFI read generated, what is the max length of HIFI read?
yukiteruono commented
Thank you for your using PBSIM3. The maximum HiFi read length is 1 million.
If you get an error message "ERROR: length parameters are not appropriate", the generation of read length distribution is not working properly, so please change the value of --length-sd.
For multi-pass sequencing in WGS simulation, the read length is set roughly equal to the value of --length-mean, and --length-sd is disabled. There was a bug in the --length-mean check, which has now been fixed.
11malong commented
Thank you so much!