yukiteruono/pbsim3

Issues

• median and quartile for length and accuracy

  #30 opened 4 months ago by nicolo-tellini
  2

• How to get the sam output file?

  #29 opened 6 months ago by tanger-code
  5

• ERROR: fastq is too long. Max acceptable length is 1000000.

  #27 opened 6 months ago by DayTimeMouse
  5

• line 8: 341073 Segmentation fault

  #28 opened 6 months ago by tanger-code
  2

• "ERROR: length parameters are not appropriate." On WGS quality score simulation

  #16 opened 8 months ago by jwalewski
  6

• HiFi Read Generation is Prohibitively Slow

  #26 opened 7 months ago by jwalewski
  4

• Improvement for HiFi : relate number of passes to dna fragment size

  #25 opened 7 months ago by Sebastien-Raguideau
  2

• simulated sequences with Ns

  #24 opened 7 months ago by zya067025
  1

• weird EP distribution in QSHMM-ONT-HQ.model

  #21 opened 8 months ago by ocxtal
  6

• PBSIM3 Doesn't Allow References >1 Billion Nucleotides Long

  #23 opened 8 months ago by jwalewski
  3

• [Feature Request] Generate all HiFi reads in a single file per sample

  #17 opened 8 months ago by jwalewski
  2

• Quality score VS Error models

  #15 opened 9 months ago by pabloangulo7
  1

• Simulation of Rolling Circle Amplification Data

  #14 opened 10 months ago by Le1223
  1

• PacBio and ONT new models

  #12 opened a year ago by farchaab
  6

• Question about tagging sam files with transcript ID

  #13 opened a year ago by nadjano
  2

• hifi reads origin position

  #11 opened a year ago by zhuyixin43
  3

• downstream hifi read stimulation

  #10 opened a year ago by zhuyixin43
  7

• PacBio HiFi reads simulation

  #8 opened 2 years ago by kisarur
  3

• About read length in multi-pass read simulation

  #9 opened a year ago by wzboy1984
  3

• Sequences Length

  #7 opened 2 years ago by ChristosMatzoros
  2

• Generating simulated HiFi reads for a specific region

  #6 opened 2 years ago by Jong-hun-Park
  2

• PbSim3 vs PbSim2

  #5 opened 2 years ago by m5imunovic
  3

• Introducing faux heterozygosity

  #4 opened 2 years ago by casparbein
  1

• Benchmarking running time for simulation

  #3 opened 2 years ago by casparbein
  2

• samtools flagstat 0% mapped with SAM file produced by multipass

  #2 opened 2 years ago by rudigaspardo
  3

• About the max length of simulated HIFI read

  #1 opened 2 years ago by 11malong
  2