Pinned Repositories
MetGEMs
Community Metabolic Network constructor
yumyai's Repositories
yumyai/MetGEMs
Community Metabolic Network constructor
yumyai/16S-dada2
Snakemake pipeline for amplicon sequencing using dada2
yumyai/ampliseq
Amplicon sequencing analysis workflow using DADA2 and QIIME2
yumyai/awesome-graph-embedding
A collection of important graph embedding, classification and representation learning papers with implementations.
yumyai/docker-pandas
Pandas installed on Debian/Alpine Linux
yumyai/fasta-search
Web interface for searching ID in FASTA.
yumyai/gff3toddbj
Convert GFF3 + FASTA to DDBJ annotation
yumyai/grabseqs
A utility for easy downloading of reads from next-gen sequencing repositories like NCBI SRA
yumyai/hugo-geekdoc
Hugo theme made for documentation
yumyai/koeken
A Linear Discriminant Analysis Effect Size (LEfSe) wrapper.
yumyai/ksiga
K-mer signature analysis tool
yumyai/manga-image-translator
一键翻译各类图片内文字 https://touhou.ai/imgtrans/
yumyai/metabolic-entities-corpus
Metabolic entities corpus
yumyai/nxf-cutadapt-test
Testing cutadapt
yumyai/nxf-fastp-test
For testing
yumyai/nxf-kraken2
A simple nextflow pipeline for running kraken2 and bracken in a docker container
yumyai/nxf-test
For testing
yumyai/rna-seq-showcase
Showcase for RNA-seq analysis
yumyai/shiny-testbed
For testing shiny adoptation
yumyai/snowChat
Chat snowflake database - Text to SQL
yumyai/test-datasets
Test data to be used for automated testing with the nf-core pipelines
yumyai/vsearchpipeline
VSEARCH pipeline for ASV inference of 16S seq data
yumyai/yumyai.github.io