yuxiangtan

Pinned Repositories

WGS_workflow
From clean reads to genome with annotations
Language:Python00
StrainPanDA
A method for reconstruction of subspecies composition and functional profiles from metagenomic data
Language:C13 4 255
StrainPanDA-data
Language:HTML0 3 00
BUSM-git
Language:Python00
conda_packages
Holding all the conda packages build file
Language:Shell01
FPfilter
A VCF filter for WGS data to filter FPs without losing too many TPs
Language:Shell31
QueryFuse
A gene specific fusion detection tool
Language:Python13
SimFuse
An RNA-Seq based fusion simulator
Language:Python30
SimStr
A pipeline to generate simulation datasets for evaluation on strain analysis from metagenomic data
Language:R10

yuxiangtan's Repositories

yuxiangtan/FPfilter
A VCF filter for WGS data to filter FPs without losing too many TPs
Language:Shell31
yuxiangtan/SimFuse
An RNA-Seq based fusion simulator
Language:Python30
yuxiangtan/QueryFuse
A gene specific fusion detection tool
Language:Python13
yuxiangtan/SimStr
A pipeline to generate simulation datasets for evaluation on strain analysis from metagenomic data
Language:R10
yuxiangtan/BUSM-git
Language:Python00
yuxiangtan/conda_packages
Holding all the conda packages build file
Language:Shell01