Pinned Repositories
19fall-cloud-term-proj
Term Project for Cloud Infrastructure during Fall 2019
advdb-hw1
alphafold
Open source code for AlphaFold. Modified to only produce intermediate representations at a faster speed.
CLEAN_GPU
A modified version of CLEAN with GPU enabled for Docker and providing a script to build Singularity image for training CLEAN with GPU.
CLEAN_singularity
Singularity runner for train CLEAN
DCVD
docking-viz
Visualization of docking result in sdf format using py3Dmol
GPCR-public
Official repository for "A ligand image-based and structure-based representation deep learning framework identifies candidate therapeutics for treating chronic pain by targeting GPCRs"
intfold
Generate intermediate representations using AlphaFold2 and ColabFold
yuxin212's Repositories
yuxin212/intfold
Generate intermediate representations using AlphaFold2 and ColabFold
yuxin212/19fall-cloud-term-proj
Term Project for Cloud Infrastructure during Fall 2019
yuxin212/advdb-hw1
yuxin212/alphafold
Open source code for AlphaFold. Modified to only produce intermediate representations at a faster speed.
yuxin212/CLEAN_GPU
A modified version of CLEAN with GPU enabled for Docker and providing a script to build Singularity image for training CLEAN with GPU.
yuxin212/CLEAN_singularity
Singularity runner for train CLEAN
yuxin212/DCVD
yuxin212/docking-viz
Visualization of docking result in sdf format using py3Dmol
yuxin212/GPCR-public
Official repository for "A ligand image-based and structure-based representation deep learning framework identifies candidate therapeutics for treating chronic pain by targeting GPCRs"
yuxin212/gpu-final
yuxin212/gpu-hw1
yuxin212/gpu-hw2
yuxin212/gpu-hw3
yuxin212/gpu-hw4
yuxin212/gpu-hw5
yuxin212/gpu-midterm
yuxin212/ImageMol
ImageMol is a molecular image-based pre-training deep learning framework for computational drug discovery.
yuxin212/infovisfinaldata
yuxin212/LISA-CPI
Official repo for A deep learning framework combining molecular image and protein structural representation identifies candidate drugs for chronic pain.
yuxin212/mathforaihw1
Code and output for problem 7
yuxin212/modified-alphafold-singularity
A singularity image of modified AlphaFold2 which only use model 1 and generates intermediate representations
yuxin212/ProphetNet-FSDP
Train models using FSDP
yuxin212/yuxin212.github.io