yycunc

ccsmeth

Detecting DNA methylation from PacBio CCS reads

yuchenyanggroup.github.io

FIREcaller

FIREcaller: an R package for detecting frequently interacting re-gions from Hi-C data

iSMNN

iSMNN: Batch Effect Correction for Single-cell RNA-seq data via Iterative Supervised Mutual Nearest Neighbor Refinement

MUNIn

MUNIn (Multiple tissue UNifying long-range chromatin Interaction detector): a statistical framework for identifying long-range chromatin interactions from multiple tissues/samples

SAFEclustering

SAFE (Single-cell Aggregated clustering From Ensemble): Cluster ensemble for single-cell RNA-seq data

SAMEclustering

SAME (Single-cell RNA-seq Aggregated clustering via Mixture model Ensemble): Cluster ensemble for single-cell RNA-seq data

scATAC_analysis_pipleline_for_zebrafish_heart_regeneration

SMNN

SMNN: Batch Effect Correction for Single-cell RNA-seq data via Supervised Mutual Nearest Neighbor Detection

yycunc.github.io

yycunc/SAFEclustering

SAFE (Single-cell Aggregated clustering From Ensemble): Cluster ensemble for single-cell RNA-seq data

yycunc/SAMEclustering

SAME (Single-cell RNA-seq Aggregated clustering via Mixture model Ensemble): Cluster ensemble for single-cell RNA-seq data

yycunc/FIREcaller

FIREcaller: an R package for detecting frequently interacting re-gions from Hi-C data

yycunc/iSMNN

iSMNN: Batch Effect Correction for Single-cell RNA-seq data via Iterative Supervised Mutual Nearest Neighbor Refinement

yycunc/SMNN

SMNN: Batch Effect Correction for Single-cell RNA-seq data via Supervised Mutual Nearest Neighbor Detection

yycunc/yycunc.github.io

yycunc/MUNIn

MUNIn (Multiple tissue UNifying long-range chromatin Interaction detector): a statistical framework for identifying long-range chromatin interactions from multiple tissues/samples

yycunc/scATAC_analysis_pipleline_for_zebrafish_heart_regeneration