Pinned Repositories
aprank
This is APRANK, an Antigenic Protein and Peptide Ranker.
COVID_visuals
GenomePackages
BSgenome R packages created for Bioconductor analysis
ggcovid
visualizations for BCFB SARS-covid-2 sequencing pipelines
GIFs
GISAID_metadata_explorer
MixtureDetection_KNN
Identify WGS samples infected with multiple strains of slow evolving pathogens
RNA-seq-InfluenzaNP-CD8-T-cells
StrainEvolve_TemporalNMF
Use Temporal Non-negative Matrix factorization to study strain evolution
WASP
WASP: A Workflow for Antibody Sequencing Profiling
yyw-informatics's Repositories
yyw-informatics/aprank
This is APRANK, an Antigenic Protein and Peptide Ranker.
yyw-informatics/COVID_visuals
yyw-informatics/GenomePackages
BSgenome R packages created for Bioconductor analysis
yyw-informatics/ggcovid
visualizations for BCFB SARS-covid-2 sequencing pipelines
yyw-informatics/GIFs
yyw-informatics/GISAID_metadata_explorer
yyw-informatics/MixtureDetection_KNN
Identify WGS samples infected with multiple strains of slow evolving pathogens
yyw-informatics/RNA-seq-InfluenzaNP-CD8-T-cells
yyw-informatics/StrainEvolve_TemporalNMF
Use Temporal Non-negative Matrix factorization to study strain evolution
yyw-informatics/WASP
WASP: A Workflow for Antibody Sequencing Profiling
yyw-informatics/idseq-workflows
Portable WDL workflows for IDseq production pipelines
yyw-informatics/MSSPE_datasets
Benchmarking datasets and primer sets
yyw-informatics/pdfs
yyw-informatics/SARS-CoV-2_Sequencing
A collection of sequencing protocols and bioinformatic resources for SARS-CoV-2 sequencing.
yyw-informatics/thailand_movement_network_analysis
yyw-informatics/Workflow_WGStoStrains
Reproducible workflow in R to process vcf files and characterize SNP patterns from WGS data
yyw-informatics/YYW-UMN
Config files for my GitHub profile.