Pinned Repositories
annotation_buddy
AOC2022
Advent of Code 2022
cellpose3
Zac's fork on cellpose for custom changes of hard coded values
keyboard-shortcuts
Backup of Dygma layers and Karabiner-Elements shortcuts
LUTs
custom lookup tables
Macros
FIJI Macros
opticalFlow
Scripts for interactively visualizing and batch quantifying the optical flow of image sequences
temporal-derivative-plots
Interactive Matplotlib interface to visualize the relative contributions of spatially separated signal loss and signal gain to the overall signal in the field of view
volume-distribution
A semi-automated pipeline for filtering 3D segmentations, and measuring the relative orientation of cells and spindles in 3D space.
waveAnalysis
Python tools for batch analysis of oscillatory dynamics
zacswider's Repositories
zacswider/LUTs
custom lookup tables
zacswider/Macros
FIJI Macros
zacswider/opticalFlow
Scripts for interactively visualizing and batch quantifying the optical flow of image sequences
zacswider/waveAnalysis
Python tools for batch analysis of oscillatory dynamics
zacswider/annotation_buddy
zacswider/AOC2022
Advent of Code 2022
zacswider/cellpose3
Zac's fork on cellpose for custom changes of hard coded values
zacswider/keyboard-shortcuts
Backup of Dygma layers and Karabiner-Elements shortcuts
zacswider/microfilm2
Zac's fork of microfilm for creating figures and animations for multi-channel images with a focus on microscopy.
zacswider/napari-annotation
package description
zacswider/napari_scripts
Collection of useful (to me) python scripts for interacting with napari
zacswider/README_Images
zacswider/temporal-derivative-plots
Interactive Matplotlib interface to visualize the relative contributions of spatially separated signal loss and signal gain to the overall signal in the field of view
zacswider/volume-distribution
A semi-automated pipeline for filtering 3D segmentations, and measuring the relative orientation of cells and spindles in 3D space.
zacswider/routine_image_kit
Routine image processing and visualization utilities
zacswider/zacswider.github.io
A little bit about me and my background.