Pinned Repositories
Deprecated--phylomap
Development of this code has stopped, please use https://github.com/zhangjiajie/PhyloMap
EPA-classifier
Classification of sequences using EPA
nanonet
First generation RNN basecaller
ncbi_taxonomy
A python program to query the NCBI taxonomy tree. This code is now UNMAINTAINED, as it has been integrated in the ETE toolkit (http://github.com/jhcepas/ete)
pGMYC
Python implementation of the GMYC model
PhyloMap
Visualizing large sequence data sets
phylotaxonomy
Annotation phylogenetics tree with taxonomic tags
PTP
PTP model for species delimitation
PTP-light
A light PTP version with minimal dependency
PTP-web-server
Species delimitation web server
zhangjiajie's Repositories
zhangjiajie/PTP
PTP model for species delimitation
zhangjiajie/EPA-classifier
Classification of sequences using EPA
zhangjiajie/PTP-web-server
Species delimitation web server
zhangjiajie/pGMYC
Python implementation of the GMYC model
zhangjiajie/PhyloMap
Visualizing large sequence data sets
zhangjiajie/Deprecated--phylomap
Development of this code has stopped, please use https://github.com/zhangjiajie/PhyloMap
zhangjiajie/nanonet
First generation RNN basecaller
zhangjiajie/ncbi_taxonomy
A python program to query the NCBI taxonomy tree. This code is now UNMAINTAINED, as it has been integrated in the ETE toolkit (http://github.com/jhcepas/ete)
zhangjiajie/phylotaxonomy
Annotation phylogenetics tree with taxonomic tags
zhangjiajie/PTP-light
A light PTP version with minimal dependency
zhangjiajie/python_template
zhangjiajie/rlnote
reinforcement learning notes
zhangjiajie/tax_benchmark
benchmark for taxonomy classification
zhangjiajie/utility
Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCR