zhangzh-orange's Stars
ahmetbersoz/chatgpt-prompts-for-academic-writing
This list of writing prompts covers a range of topics and tasks, including brainstorming research ideas, improving language and style, conducting literature reviews, and developing research plans.
bittremieux/spectrum_utils
Python package for efficient mass spectrometry data processing and visualization
wfondrie/depthcharge
A deep learning toolkit for mass spectrometry
1ssb/torchkan
An easy to use PyTorch implementation of the Kolmogorov Arnold Network and a few novel variations
Bogdanob/XLMS_decoyFusion
The Performance of Context Sensitive Filtering Combined with Decoy Fusion on XL-MS data
pFindStudio/pDeepXL
pDeepXL: MS/MS spectrum prediction for cross-linked peptide pairs by deep learning
jalew188/EuBIC2024-APD
AlphaPeptDeep notebooks for EuBIC-2024 Winterschool
diogobor/Scout
MS-cleavable search engine that enables interactomic analysis by identifying tandem mass spectra of cross-linked peptides.