zhangzhiyangcs's Stars
mmatschiner/tutorials
Tutorials on phylogenetic and phylogenomic inference
crazyhottommy/ChIP-seq-analysis
ChIP-seq analysis notes from Ming Tang
stephenturner/oneliners
Useful bash one-liners for bioinformatics.
lauguma/GWideCodeML
A Python package for testing evolutionary hypotheses in genome-wide approaches.
dongzhang0725/PhyloSuite
PhyloSuite is an integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies
gadenbuie/gentle-ggplot2
📊 A Gentle Guide to the Grammar of Graphics with ggplot2
DyogenIBENS/Agora
Algorithm For Gene Order Reconstruction in Ancestors
CshlSiepelLab/phast
PHAST
waveygang/wfmash
base-accurate DNA sequence alignments using WFA and mashmap3
vcflib/vcflib
C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings
simonhmartin/genomics_general
General tools for genomic analyses.
jtlovell/GENESPACE
BGI-shenzhen/Reseqtools
A Toolkit for analyzing next-generation DNA Re-Sequencing data
KamilSJaron/oh-know
k-mer learning materials
RealTimeGenomics/rtg-tools
RTG Tools: Utilities for accurate VCF comparison and manipulation
tpoorten/dotPlotly
Generate an interactive dot plot from mummer or minimap alignments