zhangzhiyangcs

zhangzhiyangcs's Stars

• mmatschiner/tutorials

  Tutorials on phylogenetic and phylogenomic inference

  Language:HTML351164

• crazyhottommy/ChIP-seq-analysis

  ChIP-seq analysis notes from Ming Tang

  Language:Python732294

• stephenturner/oneliners

  Useful bash one-liners for bioinformatics.

  1.8k519

• lauguma/GWideCodeML

  A Python package for testing evolutionary hypotheses in genome-wide approaches.

  Language:Python3111

• dongzhang0725/PhyloSuite

  PhyloSuite is an integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies

  Language:Python14224

• gadenbuie/gentle-ggplot2

  📊 A Gentle Guide to the Grammar of Graphics with ggplot2

  Language:HTML8421

• DyogenIBENS/Agora

  Algorithm For Gene Order Reconstruction in Ancestors

  Language:Python6915

• CshlSiepelLab/phast

  PHAST

  Language:C6724

• waveygang/wfmash

  base-accurate DNA sequence alignments using WFA and mashmap3

  Language:C++17416

• vcflib/vcflib

  C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings

  Language:C++613218

• simonhmartin/genomics_general

  General tools for genomic analyses.

  Language:Python32792

• jtlovell/GENESPACE

  Language:R18024

• BGI-shenzhen/Reseqtools

  A Toolkit for analyzing next-generation DNA Re-Sequencing data

  8129

• KamilSJaron/oh-know

  k-mer learning materials

  Language:Jupyter Notebook419

• RealTimeGenomics/rtg-tools

  RTG Tools: Utilities for accurate VCF comparison and manipulation

  Language:Java28650

• tpoorten/dotPlotly

  Generate an interactive dot plot from mummer or minimap alignments

  Language:HTML18852