Pinned Repositories
anno
Anno is a variant annotation tool
cat
Arnold Cat
checkVCF
Sanity check Variant Call Format (VCF) files.
cromwellDashboard
A Dashboard to Visualize Scientific Workflows in Cromwell
libMvtnorm
Multivariate normal distribution (C++)
MB-GAN
Microbiome Simulation via Generative Adversarial Network
rvtests
Rare variant test software for next generation sequencing data
seqminer
Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R
vcf2geno
Convert Variant Call Format (VCF) file to genotype file
wdl-mode
WDL (Workflow Description Language) major mode
zhanxw's Repositories
zhanxw/checkVCF
Sanity check Variant Call Format (VCF) files.
zhanxw/anno
Anno is a variant annotation tool
zhanxw/cat
Arnold Cat
zhanxw/wdl-mode
WDL (Workflow Description Language) major mode
zhanxw/cromwellDashboard
A Dashboard to Visualize Scientific Workflows in Cromwell
zhanxw/bench
Monitor resources usage
zhanxw/ancestry
zhanxw/BayesSLAM
Bayesian Statistical Learning Approach for Microbiome
zhanxw/birdseed2vcf
Convert birdseed variant file with genotypes to a VCF file
zhanxw/md2html
A simple tool to convert Markdown file to HTML file.
zhanxw/mycode
common practice of programming, useful code snippets...
zhanxw/rvtests-docker
zhanxw/bioconda-recipes
Conda recipes for the bioconda channel.
zhanxw/cbioportal
cBioPortal for Cancer Genomics
zhanxw/compile-ci
zhanxw/cromwell
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
zhanxw/FMAP
Functional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies
zhanxw/IntegrativeBayes
zhanxw/leafcutter
LeafCutter: Annotation-free quantification of RNA splicing. Yang I Li, David A Knowles, Jonathan K Pritchard.
zhanxw/linux-insides
A little bit about a linux kernel
zhanxw/Mask_RCNN
Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow
zhanxw/mctoolsr
Microbial community analysis tools in R
zhanxw/melpa
Recipes and build machinery for the biggest Emacs package repo
zhanxw/MicrobiomeBayesDiff
zhanxw/microbiomeViz
Visualize microbiome data with black magic ggtree
zhanxw/mt-dnn
Multi-Task Deep Neural Networks for Natural Language Understanding
zhanxw/re2
Adopt Google/re2 library for R
zhanxw/TCR_explorer
zhanxw/TCR_explorer_package
zhanxw/XiaoweiLib
Python library for Xiaowei's daily work