/BlastFrostSNP

Use BlastFrost to identify QRDR SNPs

Primary LanguagePythonGNU General Public License v3.0GPL-3.0

BlastFrostSNP

Use BlastFrost to identify QRDR SNPs

Depends on BiFrost and BlastFrost

  • Command to run
python BlastFrostSNP.py -q QRDR.fasta -s QRDR.list -o <prefix> -g <BiFrost gfa output> -k <kmer for BiFrost> -b <BlastFrost executable>