zhen-fu

bioc_rna_seq

This is the repo for data and code for RNA-seq analysis

CDseq

Circle Damage Sequencing (CD-seq) Analysis workflow

ChAMP

psyllid_16S

R_grouped_bar_making

Simple R code to make plots

rnaseq_workflow

snakemake workflow for bulk RNA-seq workflow using STAR-edgeR

Soi_16S_seq

This is the analysis pipeline for 16S sequencing data

teaching_demo

This is for the teaching demo of proposed course "Plant-insect-microbe interactions"

TrimGalore

A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data

trinity_treat_control

The most simple case of running Trinity RNA-seq assembly and quantify gene expression of two conditions

zhen-fu/bioc_rna_seq

This is the repo for data and code for RNA-seq analysis

zhen-fu/CDseq

Circle Damage Sequencing (CD-seq) Analysis workflow

zhen-fu/ChAMP

zhen-fu/psyllid_16S

zhen-fu/R_grouped_bar_making

Simple R code to make plots

zhen-fu/rnaseq_workflow

snakemake workflow for bulk RNA-seq workflow using STAR-edgeR

zhen-fu/Soi_16S_seq

This is the analysis pipeline for 16S sequencing data

zhen-fu/teaching_demo

This is for the teaching demo of proposed course "Plant-insect-microbe interactions"

zhen-fu/TrimGalore

A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data

zhen-fu/trinity_treat_control

The most simple case of running Trinity RNA-seq assembly and quantify gene expression of two conditions

zhen-fu/WGBS_Biscuit_Snakemake

Snakemake Workflow For WGBS Data