Pinned Repositories
pipesnake
ausarg/pipesnake is a bioinformatics best-practice analysis pipeline for phylogenomic reconstruction starting from short-read 'second-generation' sequencing data.
mgikit
mgikit is a collection of tools used to demultiplex fastq files and generate demultiplexing and quality reports.
mgikit-multiqc
MultiQC plugin to parse and integrate reports generated by mgikit demultiplexer
bioconda-recipes
Conda recipes for the bioconda channel.
cloudgene3
A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.
consHap
Majority voting method to construct consensus haplotype estimator from multiple phased haplotypes.
eQTLHap
eQTLHap: a comprehensive eQTL analysis tool.
GESim
Gene expression simulator from genotype/haplotype data
Parallel-Programming
zerocaller
Nextflow workflow for read alignment, variant calling and annotation developed for the ZERO Childhood Cancer Project.
ziadbkh's Repositories
ziadbkh/eQTLHap
eQTLHap: a comprehensive eQTL analysis tool.
ziadbkh/consHap
Majority voting method to construct consensus haplotype estimator from multiple phased haplotypes.
ziadbkh/GESim
Gene expression simulator from genotype/haplotype data
ziadbkh/Parallel-Programming
ziadbkh/zerocaller
Nextflow workflow for read alignment, variant calling and annotation developed for the ZERO Childhood Cancer Project.
ziadbkh/bioconda-recipes
Conda recipes for the bioconda channel.
ziadbkh/DataMining
Lecture notes for Advances in Data Mining
ziadbkh/generate_fastq
generate fastq files for demultipexing testing
ziadbkh/nf_testing
ziadbkh/ziadbkh.github.io
Personal webpage of Ziad Al Bkhetan.
ziadbkh/jointcalling-ref38
ziadbkh/modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
ziadbkh/test-data
Test data for MultiQC.
ziadbkh/website
Nextflow public web site