Pinned Repositories
BIGpipeline
storage for the materials of Ziyi's chapter(s) for BIG pipeline
BIOS560R-2019
Repository forBIOS560R-2019
CAMLU
Cell Annotation using Machine Learning-based method for the presence of Unknown cells (CAMLU)
caROC
A package for assessment of continuous biomarkers.
DistributedLearningPredictor
Repository for Distributed Learning Prediction Models
GBC
Generalized Biclustering
RegionalST
Investigating regions of interest and performing cross-regional analysis with spatial transcriptomics data
ssPCA
TOAST
Tools for the analysis of heterogeneous tissues
TransCox
Provide transfer learning-based Cox Proportional Hazards model
ziyili20's Repositories
ziyili20/CAMLU
Cell Annotation using Machine Learning-based method for the presence of Unknown cells (CAMLU)
ziyili20/TOAST
Tools for the analysis of heterogeneous tissues
ziyili20/DistributedLearningPredictor
Repository for Distributed Learning Prediction Models
ziyili20/GBC
Generalized Biclustering
ziyili20/RegionalST
Investigating regions of interest and performing cross-regional analysis with spatial transcriptomics data
ziyili20/ssPCA
ziyili20/TransCox
Provide transfer learning-based Cox Proportional Hazards model
ziyili20/BIGpipeline
storage for the materials of Ziyi's chapter(s) for BIG pipeline
ziyili20/BIOS560R-2019
Repository forBIOS560R-2019
ziyili20/caROC
A package for assessment of continuous biomarkers.
ziyili20/deep_lda
Implementation of Deep Linear Discriminant Analysis (DeepLDA)
ziyili20/DSS
ziyili20/ENAR2021ShortCourse
ziyili20/NeuCA
Neural-network based Cell Annotation tool
ziyili20/partCNV
An R package to improve the detection of locally aneuploid cells by incorporating cytogenetics information.
ziyili20/SCATS
A statistical tool to detect differential alternative splicing events using single-cell RNA-seq
ziyili20/scRNAIdent
ziyili20/TransCox_reproduceFigures
Contain code to reproduce the simulation results and figures
ziyili20/ziyili20.github.io