ziyy

Pinned Repositories

• EBCall

  an empirical Bayesian framework for mutation detection from cancer genome sequencing data

  Language:Perl10

• cnvkit

  Copy number variant detection from targeted DNA sequencing

  Language:Python00

• deepvariant

  DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

  Language:Python00

• facets

  Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.

  Language:R00

• igv

  Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

  Language:Java00

• RSeQC

  fork of RSeQC python RNAseq metrics suit of tools

  Language:Python00

• STAR-Fusion

  STAR-Fusion codebase

  Language:Perl00

• VarDict

  VarDict

  Language:Perl00

ziyy's Repositories