Code to reproduce results in the microbiome taxonomic abundances control paper
There is a README within each subfolder
ibd subfolder: real and synthetic analysis of IBDMDB data
ibd/data: processed data. This folder needs to be run first to provide data for other folders to perform ibd analysis.
ibd/real: real data analysis
ibd/simulation: simulation data analysis
zhang subfolder: analysis for synthetic data based on Zhang 2021 Bioinformatics paper