zlibto

zlibto's Stars

• lh3/minimap2

  A versatile pairwise aligner for genomic and spliced nucleotide sequences

  Language:C1.8k404

• lmdu/pyfastx

  a python package for fast random access to sequences from plain and gzipped FASTA/Q files

  Language:C26021

• pysam-developers/pysam

  Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtools, bcftools, and tabix.

  Language:Cython773274

• pyranges/pyranges

  Performant Pythonic GenomicRanges

  Language:Python43646

• ckjellson/textalloc

  Allocates text labels in matplotlib

  Language:Jupyter Notebook626

• Phlya/adjustText

  A small library for automatically adjustment of text position in matplotlib plots to minimize overlaps.

  Language:Jupyter Notebook1.5k87

• zauberzeug/nicegui

  Create web-based user interfaces with Python. The nice way.

  Language:Python8.8k534

• np-core/modules

  Nextflow DSL2 implementations of pipeline modules for bacterial (nanopore) genomics :lizard:

  Language:Nextflow52

• AustralianBioCommons/Nextflow_DSL2_template

  Template for creating Nextflow DSL2 pipelines

  62

• telatin/nextflow-example

  A simple DSL2 workflow: tutorial

  Language:Nextflow257

• seqeralabs/nextflow-tutorial

  Nextflow training material for introductory tutorial

  Language:Nextflow10045