zrqiao

zrqiao's Stars

• amix/vimrc

  The ultimate Vim configuration (vimrc)

  Language:Vim Script30.6k7.3k

• github/copilot.vim

  Neovim plugin for GitHub Copilot

  Language:Vim Script8.3k289

• BioinfoMachineLearning/PoseBench

  Comprehensive benchmarking of protein-ligand structure generation methods (ICML 2024 AI4Science)

  Language:Jupyter Notebook643

• rochoa85/PepFun

  Bioinformatics and Cheminformatics protocols for peptide analysis

  Language:Jupyter Notebook359

• lbcb-sci/RiNALMo

  RiboNucleic Acid (RNA) Language Model

  Language:Python589

• SHI-Labs/NATTEN

  Neighborhood Attention Extension. Bringing attention to a neighborhood near you!

  Language:Cuda34727

• atong01/conditional-flow-matching

  TorchCFM: a Conditional Flow Matching library

  Language:Python1.1k85

• dina-lab3D/CombFold

  Language:C++6814

• BlackSamorez/tensor_parallel

  Automatically split your PyTorch models on multiple GPUs for training & inference

  Language:Python61938

• pragmatic-streamlit/streamlit-molstar

  Language:JavaScript435

• PickyBinders/PickyBinder

  Docking Tool Benchmarking Workflow

  Language:Python162

• facebookresearch/DiT

  Official PyTorch Implementation of "Scalable Diffusion Models with Transformers"

  Language:Python6.1k539

• huggingface/tokenizers

  💥 Fast State-of-the-Art Tokenizers optimized for Research and Production

  Language:Rust8.9k778

• huggingface/candle

  Minimalist ML framework for Rust

  Language:Rust15.4k904

• stonewiseAIDrugDesign/Lingo3DMol

  Language:Python479

• BioinfoMachineLearning/MULTICOM3

  The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was developed by the Bioinformatics and Machine Learning Lab at the University of Missouri. It was blindly tested in CASP15 and ranked among the best server predictors in 2022. It improves AlphaFold's accuracy by 5-10%.

  Language:Python238

• zrqiao/NeuralPLexer

  NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model

  Language:Jupyter Notebook25768

• triton-lang/triton

  Development repository for the Triton language and compiler

  Language:C++12.9k1.6k

• lumol-org/lumol

  Universal extensible molecular simulation engine

  Language:Rust19018

• Boehringer-Ingelheim/pyPept

  pyPept: a python library to generate atomistic 2D and 3D representations of peptides

  Language:Python5710

• tikv/tikv

  Distributed transactional key-value database, originally created to complement TiDB

  Language:Rust15.1k2.1k

• dermesser/leveldb-rs

  A reimplementation of LevelDB in Rust (no bindings).

  Language:Rust51960

• google/leveldb

  LevelDB is a fast key-value storage library written at Google that provides an ordered mapping from string keys to string values.

  Language:C++36.3k7.8k

• skyline75489/what-happens-when-zh_CN

  What-happens-when 的中文翻译，原仓库 https://github.com/alex/what-happens-when

  8k807

• pingcap/tidb

  TiDB is an open-source, cloud-native, distributed, MySQL-Compatible database for elastic scale and real-time analytics. Try AI-powered Chat2Query free at : https://www.pingcap.com/tidb-serverless/

  Language:Go37k5.8k

• razvanmarinescu/EB1A

  EB1A Full Application - I-140 and I-485

  Language:TeX22277

• google-deepmind/uncertain_ground_truth

  Dermatology ddx dataset, Jax implementations of Monte Carlo conformal prediction, plausibility regions and statistical annotation aggregation from our recent work on uncertain ground truth (TMLR'23 and ArXiv pre-print).

  Language:Python53533

• stas00/ml-engineering

  Machine Learning Engineering Open Book

  Language:Python11.1k666

• CompVis/taming-transformers

  Taming Transformers for High-Resolution Image Synthesis

  Language:Jupyter Notebook5.7k1.1k

• napoles-uach/stmol

  This is the repository for the Stmol project, a Streamlit component that uses py3Dmol to render molecules.

  Language:Python18736