UCSF pyem is a collection of Python modules and command-line utilities for electron microscopy of biological samples.
Documentation for the programs can be found in their usage text, comments in code, and in the Wiki of this repository.
The entire collection is licensed under the terms of the GNU Public License, version 3 (GPLv3).
Please cite the UCSF pyem code repository DOI: 10.5281/zenodo.3576630.
For example, the formatting for a Nature journal is:
Asarnow, D., Palovcak, E., Cheng, Y. UCSF pyem v0.5. Zenodo https://doi.org/10.5281/zenodo.3576630 (2019)
To install UCSF pyem, please follow the instructions in the project wiki.
The most popular feature of UCSF pyem is exporting particle metadata from cryoSPARC. Detailed instructions can be found in the project wiki.
(C) 2016-2019 Daniel Asarnow
University of California, San Francisco