Pinned Repositories
acebinf
Collection of simple utilities used when building bioinformatics tools
adotto
Working space for the GIAB TR benchmarking project
kanpig
Kmer Analysis of Pileups for Genotyping
laytr
Library for variant benchmarking stratification
regioners
A rust implementation of regioneR for interval overlap permutation testing
tdb
Tandem repeat database and analysis queries
truvari
Structural variant toolkit for VCFs
TruvariData
Data and Scripts relevant to the development and benchmarking of truvari
usable_vcf
Run multiple programs to check if a VCF is usable
utmos
Maximum-coverage algorithm for genomic variants
ACEnglish's Repositories
ACEnglish/truvari
Structural variant toolkit for VCFs
ACEnglish/adotto
Working space for the GIAB TR benchmarking project
ACEnglish/kanpig
Kmer Analysis of Pileups for Genotyping
ACEnglish/usable_vcf
Run multiple programs to check if a VCF is usable
ACEnglish/regioners
A rust implementation of regioneR for interval overlap permutation testing
ACEnglish/laytr
Library for variant benchmarking stratification
ACEnglish/tdb
Tandem repeat database and analysis queries
ACEnglish/utmos
Maximum-coverage algorithm for genomic variants
ACEnglish/TruvariData
Data and Scripts relevant to the development and benchmarking of truvari
ACEnglish/acebinf
Collection of simple utilities used when building bioinformatics tools
ACEnglish/bioconda-recipes
Conda recipes for the bioconda channel.
ACEnglish/bwapy
Python bindings to bwa mem
ACEnglish/mebyfrac
Leveraging Fractal-like Rules of DNA for QC
ACEnglish/paragraph
Graph realignment tools for structural variants
ACEnglish/Sniffles
Structural variation caller using third generation sequencing
ACEnglish/SVAFotate
ACEnglish/wordlexp
wordle explorer