Mathis Lab @ EPFL
Mechanisms underlying adaptive behavior in intelligent systems
Swiss Federal Institute of Technology
Pinned Repositories
AmadeusGPT
We turn natural language descriptions of behaviors into machine-executable code
Camera_Control
a Python API to record video & system timestamps from Imaging Source USB cameras
CEBRA
Learnable latent embeddings for joint behavioral and neural analysis - Official implementation of CEBRA
CEBRA-demos
CEBRA Demo Notebooks. Please see all of them at the URL below:
cebra-figures
Figures, tables and stats for Schneider, Lee and Mathis 2022: Learnable latent embeddings for joint behavioral and neural analysis.
CellSeg3D
A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks
DLC2Kinematics
a module for kinematic analysis of deeplabcut outputs
JoystickControlSystem
joystick system used in Mathis et al, 2017
modelzoo-figures
SuperAnimal models supporting data
MouseArmTransformer
A lifting transformer used to generate 3D DeepLabCut estimates for an adult mouse forelimb
Mathis Lab @ EPFL's Repositories
AdaptiveMotorControlLab/CEBRA
Learnable latent embeddings for joint behavioral and neural analysis - Official implementation of CEBRA
AdaptiveMotorControlLab/AmadeusGPT
We turn natural language descriptions of behaviors into machine-executable code
AdaptiveMotorControlLab/DLC2Kinematics
a module for kinematic analysis of deeplabcut outputs
AdaptiveMotorControlLab/Camera_Control
a Python API to record video & system timestamps from Imaging Source USB cameras
AdaptiveMotorControlLab/CellSeg3D
A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks
AdaptiveMotorControlLab/cebra-figures
Figures, tables and stats for Schneider, Lee and Mathis 2022: Learnable latent embeddings for joint behavioral and neural analysis.
AdaptiveMotorControlLab/CEBRA-demos
CEBRA Demo Notebooks. Please see all of them at the URL below:
AdaptiveMotorControlLab/modelzoo-figures
SuperAnimal models supporting data
AdaptiveMotorControlLab/JoystickControlSystem
joystick system used in Mathis et al, 2017
AdaptiveMotorControlLab/MouseArmTransformer
A lifting transformer used to generate 3D DeepLabCut estimates for an adult mouse forelimb
AdaptiveMotorControlLab/DeepLabCut
Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals incl. humans
AdaptiveMotorControlLab/DeepLabCut-Workshop-Materials
Workshop material for using DeepLabCut
AdaptiveMotorControlLab/.github
AdaptiveMotorControlLab/Docker4DeepLabCut2.0
Docker container for running DeepLabCut2.0 (linux support only)
AdaptiveMotorControlLab/SplitWheelVR
follow along for updates and information on our 2-wheel VR system for mice
AdaptiveMotorControlLab/CEBRA-assets
Web assets for CEBRA (cebra.ai) and CEBRA DOCS!
AdaptiveMotorControlLab/ml-agents
The Unity Machine Learning Agents Toolkit (ML-Agents) is an open-source project that enables games and simulations to serve as environments for training intelligent agents using deep reinforcement learning and imitation learning.
AdaptiveMotorControlLab/SegementationLabeler