AmirAlavi
Machine Learning Researcher @ Seer; Machine learning & Computational biology
Seer IncSan Francisco
Pinned Repositories
ml10707_project
nature-tex
LaTeX template and build code for a Nature style research article submission
sc-alignment-benchmarking
Supporting data and benchmarking software for our SCIPR paper. (Under Construction)
scipr
Single Cell Iterative Point set Registration (SCIPR) to align scRNA-seq data
scRNA-seq-celltype-and-tissue-markers
scrna_nn
single_cell_deg
sparsely-connected-keras
Sparsely-connected layers for Keras
tied-autoencoder-keras
Autoencoder layers (with tied encode and decode weights) for Keras
AmirAlavi's Repositories
AmirAlavi/nature-tex
LaTeX template and build code for a Nature style research article submission
AmirAlavi/tied-autoencoder-keras
Autoencoder layers (with tied encode and decode weights) for Keras
AmirAlavi/sparsely-connected-keras
Sparsely-connected layers for Keras
AmirAlavi/scrna_nn
AmirAlavi/single_cell_deg
AmirAlavi/scipr
Single Cell Iterative Point set Registration (SCIPR) to align scRNA-seq data
AmirAlavi/ml10707_project
AmirAlavi/sc-alignment-benchmarking
Supporting data and benchmarking software for our SCIPR paper. (Under Construction)
AmirAlavi/scRNA-seq-celltype-and-tissue-markers
AmirAlavi/AmirAlavi.github.io
Personal website
AmirAlavi/armatus
AmirAlavi/auto-sklearn
Automated Machine Learning with scikit-learn
AmirAlavi/bitstarter
AmirAlavi/blog-comments
Repo to allow comments on my blog via Github issues
AmirAlavi/casanovo
De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model
AmirAlavi/GATA6_R
AmirAlavi/GeoSpots
MHacks IV Android App (geofencing)
AmirAlavi/GiniClust
GiniClust: Detecting Rare Cell Types from Single-Cell Gene Expression Data with Gini Index
AmirAlavi/keras
Deep Learning for humans
AmirAlavi/matplotlib-venn
Area-weighted venn-diagrams for Python/matplotlib
AmirAlavi/setup_machine
AmirAlavi/tadFindingPrototypes
Amir Alavi's rotation work for Kingsford Group, Fall 2016