Amit-H's Stars
immunogenomics/symphony
Efficient and precise single-cell reference atlas mapping with Symphony
egeulgen/pathfindR
pathfindR: Enrichment Analysis Utilizing Active Subnetworks
BergmannLab/MONET
MONET : MOdularising NEtwork Toolbox - https://doi.org/10.1093/bioinformatics/btaa236
KenLauLab/dropkick
Automated cell filtering for single-cell RNA sequencing data
ctlab/fgsea
Fast Gene Set Enrichment Analysis
Oshlack/splatter
Simple simulation of single-cell RNA sequencing data
jcao89757/SCINA
SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples
PatWalters/practical_cheminformatics_tutorials
Practical Cheminformatics Tutorials
YosefLab/Compass
In-Silico Modeling of Metabolic Heterogeneity using Single-Cell Transcriptomes
bbuchfink/diamond
Accelerated BLAST compatible local sequence aligner.
matchai/awesome-pinned-gists
📌✨ A collection of awesome dynamic pinned gists for GitHub
broadinstitute/gtex-tutorials
afshinea/stanford-cs-229-machine-learning
VIP cheatsheets for Stanford's CS 229 Machine Learning
mcmanigle/OxThesis
LaTeX template for an Oxford University thesis
tjiagoM/gtex-transcriptome-modelling
Multilayer modelling of the human transcriptome and biological mechanisms of complex diseases and traits
OxfordCMS/OCMS_16S
apcamargo/tspex
tspex: tissue-specificity calculator
twoXes/awesome-structural-bioinformatics
Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.
mozilla/pdf.js
PDF Reader in JavaScript
skinnider/tissue-interactome-app
Shiny web application for the tissue interactome dataset
CodHeK/qsearch
:zap: Lightning fast Search Bar component for React using Trie! Get filtered results and suggested searches on the go!
brndnmtthws/thetagang
ThetaGang is an IBKR bot for collecting money
pysb/pysb
Python framework for Systems Biology modeling
imsb-uke/scGAN
Realistic in silico generation and augmentation of single cell RNA-seq data using Generative Adversarial Neural Networks
hussius/deeplearning-biology
A list of deep learning implementations in biology
cgat-developers/cgat-core
Core functionality of the CGAT code
Novartis/DRUG-seq
DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline
npbhavya/Kraken2-output-manipulation
Kraken output generates a report for each datasets, this script takes these individual output and combines it to one file, where each column is number of reads that were rooted to this taxon (column 2 in summary)
sokrypton/ColabFold
Making Protein folding accessible to all!
hfg-gmuend/openmoji
Open source emojis for designers, developers and everyone else!