Andyargueasae

A freshman for bioinformatics and machine learning. Interests focus on combination of computing and biology.

unimelb

Pinned Repositories

binny_Chloroscan
Here binny is modified to fit the database of chloroplast genome to cluster chloroplast contigs.
Language:Python10
chloroscan
The collection of snakemake workflow for MMA metagenomics for recovering chloroplast genomes.
Language:HTML20
My_assignment
the assignment 1 repository.
Language:Python00
Mybioinformatics
Aggregation of the codes in the period of self-pacing the bioinformatics and data analysis
00
CheckM2
Assessing the quality of metagenome-derived genome bins using machine learning
Language:Scilab174 8 11020
cobra
A tool to raise the quality of viral genomes assembled from short-read metagenomes via resolving and joining of contigs fragmented during de novo assembly.
Language:Python61 2 3910
DNABERT_S
DNABERT_S: Learning Species-Aware DNA Embedding with Genome Foundation Models
Language:Python75 2 2216
mantis
A package to annotate protein sequences
Language:Python53 3 516
prokka
:zap: :aquarius: Rapid prokaryotic genome annotation
Language:Perl849 47 649226
snk
Snakemake workflow management system and CLI generation tool
Language:Python33 4 683

Andyargueasae/chloroscan
The collection of snakemake workflow for MMA metagenomics for recovering chloroplast genomes.
Language:HTML20
Andyargueasae/binny_Chloroscan
Here binny is modified to fit the database of chloroplast genome to cluster chloroplast contigs.
Language:Python10
Andyargueasae/My_assignment
the assignment 1 repository.
Language:Python00
Andyargueasae/Mybioinformatics
Aggregation of the codes in the period of self-pacing the bioinformatics and data analysis
00