Pinned Repositories
genbank_to_kallisto.py
Script for converting a genbank file to a fasta file and a tsv file, for use in kallisto
gess
A tool to estimate genome size from fastq reads; python wrapper for KMC
indoor-plants
Script for chloroplast genome assembly
large-genome-assembly
organelle-assembly
super-phosphate
Script for assembling a mitochondrial genome
workflow-denovo-stacks
workflow-partial-bwa-mem
bionitio
Demonstrating best practices for bioinformatics command line tools
training
Training materials and links for plant genomics
AnnaSyme's Repositories
AnnaSyme/genbank_to_kallisto.py
Script for converting a genbank file to a fasta file and a tsv file, for use in kallisto
AnnaSyme/gess
A tool to estimate genome size from fastq reads; python wrapper for KMC
AnnaSyme/beautiful-jekyll
:sparkles: Build a beautiful and simple website in literally minutes. Demo at http://deanattali.com/beautiful-jekyll
AnnaSyme/galaxytools
:microscope::books: Galaxy Tool wrappers
AnnaSyme/genomescope
Fast genome analysis from unassembled short reads
AnnaSyme/jekyll-theme-minimal-resume
Simple Jekyll theme for a minimal resume website: https://jekyll-theme-minimal-resume.netlify.com/
AnnaSyme/MelBioInf_docs
Melbourne Bioinformatics documentation in markdown format
AnnaSyme/nf-co.re
Files for the main nf-core website >>>
AnnaSyme/porepatrol
AnnaSyme/sixess
🔬🐛 Rapid 16s rRNA identification from isolate FASTQ files
AnnaSyme/test-datasets
Test data to be used for automated testing with the nf-core pipelines
AnnaSyme/tutorials
Tutorials on how to use the microGVL to do common bacterial bioinformatic tasks