ArianeMora

ArianeMora's Stars

• duerrsimon/folding_tools

  A collection of *fold* tools

  203

• deepchem/deepchem

  Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

  Language:Python5.6k1.7k

• WRiegs/Masters_thesis

  All source code used in my Master's Thesis.

  Language:Python2

• jwohlwend/boltz

  Official repository for the Boltz-1 biomolecular interaction model

  Language:Python1.4k160

• ImagineAILab/ai-by-hand-excel

  2.2k320

• Wytamma/snk

  Snakemake workflow management system and CLI generation tool

  Language:Python514

• Edinburgh-Genome-Foundry/DnaWeaver

  A route planner for DNA assembly

  Language:Python319

• jsunn-y/CARE

  CARE: a Benchmark Suite for the Classification and Retrieval of Enzymes

  Language:Jupyter Notebook28

• TattaBio/OMG

  Language:Python291

• camillejmora/bivariate-map

  Code to plot bivariate map.

  Language:Jupyter Notebook1

• saezlab/MetaProViz

  R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.

  Language:HTML131

• argoproj-labs/hera

  Hera makes Python code easy to orchestrate on Argo Workflows through native Python integrations. It lets you construct and submit your Workflows entirely in Python. ⭐️ Remember to star!

  Language:Python629106

• tseemann/prokka

  :zap: :aquarius: Rapid prokaryotic genome annotation

  Language:Perl854229

• chaidiscovery/chai-lab

  Chai-1, SOTA model for biomolecular structure prediction

  Language:Python1.5k186

• mikolmogorov/Flye

  De novo assembler for single molecule sequencing reads using repeat graphs

  Language:C795169

• AspirinCode/papers-for-molecular-design-using-DL

  List of Molecular and Material design using Generative AI and Deep Learning

  70397

• jocelynnpearl/codon_tools

  AA reverse translation and DNA optimization tool

  Language:Python64

• amorehead/awesome-molecular-generation

  Awesome papers related to generative molecular modeling and design.

  31040

• luwei0917/DynamicBind

  repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model

  Language:Jupyter Notebook21345

• rxn4chemistry/biocatalysis-model

  RXN for biochemical reactions

  Language:Python6514

• veg/phylotree.js

  Interactive viewer of phylogenetic trees

  Language:JavaScript17078

• wilzbach/msa

  Modular BioJS compoment for a multiple sequence alignment

  Language:JavaScript16879

• d3/d3

  Bring data to life with SVG, Canvas and HTML. :bar_chart::chart_with_upwards_trend::tada:

  Language:Shell109k22.9k

• tamminenlab/npysearch

  Python bindings for the nsearch library (https://github.com/stevschmid/nsearch)

  Language:C++32

• ferru97/PyPaperBot

  PyPaperBot is a Python tool for downloading scientific papers using Google Scholar, Crossref, SciHub, and SciDB.

  Language:Python42278

• weecology/NeonTreeEvaluation_package

  R package for evaluating individual tree crown predictions against a diverse benchmark dataset

  Language:R237

• OpenDroneMap/WebODM

  User-friendly, commercial-grade software for processing aerial imagery. 🛩

  Language:JavaScript3k969

• OpenDroneMap/ODM

  A command line toolkit to generate maps, point clouds, 3D models and DEMs from drone, balloon or kite images. 📷

  Language:Python4.9k1.1k

• LipiTUM/pymantra

  Metabolic Reaction Analysis and Multi-Omics Associations from Untargeted Metabolomics

  Language:C++4

• pyproj4/pyproj

  Python interface to PROJ (cartographic projections and coordinate transformations library)

  Language:Python1.1k215