Test failed, can't find HXB2-RT.txt

[donkirkby]

I removed the Biopp.csv requirement from setup.py to see if things would work without it. The install worked, but one of the tests failed.

~/git/gotoh2$ . runTests.sh 
...
---AAAGGG---
TTAAAAGGGGTT
16
..E.
======================================================================
ERROR: test_pol (test.TestHIV)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/mnt/data/don/git/gotoh2/tests/test.py", line 71, in test_pol
    with open('HXB2-RT.txt', 'rU') as f:
IOError: [Errno 2] No such file or directory: 'HXB2-RT.txt'

----------------------------------------------------------------------
Ran 7 tests in 0.002s

FAILED (errors=1)

You've also got some debugging output polluting your unit test report.

[ArtPoon]

Doh. Forgot to commit a couple of data files. Sorry about that, will fix.

…

Sent from my iPhone

On May 1, 2017, at 5:43 PM, Don Kirkby ***@***.***> wrote: I removed the Biopp.csv requirement from setup.py to see if things would work without it. The install worked, but one of the tests failed. ~/git/gotoh2$ . runTests.sh ... ---AAAGGG--- TTAAAAGGGGTT 16 ..E. ====================================================================== ERROR: test_pol (test.TestHIV) ---------------------------------------------------------------------- Traceback (most recent call last): File "/mnt/data/don/git/gotoh2/tests/test.py", line 71, in test_pol with open('HXB2-RT.txt', 'rU') as f: IOError: [Errno 2] No such file or directory: 'HXB2-RT.txt' ---------------------------------------------------------------------- Ran 7 tests in 0.002s FAILED (errors=1) You've also got some debugging output polluting your unit test report. — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub, or mute the thread.