Pinned Repositories
ads1-notebooks
Copies of notebooks used in the practical sessions for Algorithms for DNA Sequencing
AI-MOO
AzkaSaleem
Config files for my GitHub profile.
AzkaSaleem_MachineLearning_practice
Bioinformatics-Specialization-Coursera
Bioinformatics Specialization Journey to the Frontier of Computational Biology. Master bioinformatics software and computational approaches in modern biology.
bioinformatics-workflows
minimal example implementations for bioinformatics workflow managers
EpiNano
Detection of RNA modifications from Oxford Nanopore direct RNA sequencing reads (Liu*, Begik* et al., Nature Comm 2019)
exomePeak
Analysis of RNA epitranscriptome sequencing data with affinity-based shotgun sequencing approach
Funm6AViewer
Identification and visualization of functional differential m6A methylation genes (FDmMGenes) and single base DmM sites.
merip_reanalysis_scripts
Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq
AzkaSaleem's Repositories
AzkaSaleem/AzkaSaleem
Config files for my GitHub profile.
AzkaSaleem/EpiNano
Detection of RNA modifications from Oxford Nanopore direct RNA sequencing reads (Liu*, Begik* et al., Nature Comm 2019)
AzkaSaleem/AI-MOO
AzkaSaleem/AzkaSaleem_MachineLearning_practice
AzkaSaleem/Bioinformatics-Specialization-Coursera
Bioinformatics Specialization Journey to the Frontier of Computational Biology. Master bioinformatics software and computational approaches in modern biology.
AzkaSaleem/bioinformatics-workflows
minimal example implementations for bioinformatics workflow managers
AzkaSaleem/Computational-Genomics-with-R-2020-
Book
AzkaSaleem/DeepM6ASeq
a deep-learning-based framework for studying m6A
AzkaSaleem/DenverCoder1
Jonah Lawrence's Profile README
AzkaSaleem/EDA_pandas_profiling-App
This app is a Streamlit dashboard that allows you to explore the data in the dataset.
AzkaSaleem/feschenko
My personal repo.
AzkaSaleem/gcp-demo
AzkaSaleem/HRIBO
We present HRIBO (High-throughput annotation by Ribo-seq), a workflow to enable reproducible and high-throughput analysis of bacterial Ribo-seq data. The workflow performs all required pre-processing steps and quality control. Importantly, HRIBO outputs annotation-independent ORF predictions based on two complementary prokaryotic-focused tools, an
AzkaSaleem/Intro-to-ChIPseq
Intro to ChIPseq using HPC
AzkaSaleem/MACS
MACS -- Model-based Analysis of ChIP-Seq
AzkaSaleem/ml-model-application-webapp
AzkaSaleem/MyGenomicDS_practice
AzkaSaleem/nucleotide-count-webapp
AzkaSaleem/OrthoFinder
Phylogenetic orthology inference for comparative genomics
AzkaSaleem/Pandas-Tips-and-tricks
This repository include Tips and Tricks used in Python by using most popular Pandas Library.
AzkaSaleem/PEA
PEA: an integrated R toolkit for epitranscriptome analysis
AzkaSaleem/Python-for-Datascience-practice
Aammar_python_codanics
AzkaSaleem/pythonkachilla_version2
This repository contains materials and files for Python ka chilla version 2.0 (version means course ka version not of python)
AzkaSaleem/streamlit-example
Example Streamlit app that you can fork to test out share.streamlit.io
AzkaSaleem/streamlitbasics-webapp
AzkaSaleem/Transcriptomics
AzkaSaleem/TRESS
Toobox for RNA Methylation Sequencing Analysis
AzkaSaleem/try
test
AzkaSaleem/wordle-clue-webapp
AzkaSaleem/zumrudu-anka
🐲 GitHub Profile Readme