Pinned Repositories
ads1-notebooks
Copies of notebooks used in the practical sessions for Algorithms for DNA Sequencing
AI-MOO
AzkaSaleem
Config files for my GitHub profile.
AzkaSaleem_MachineLearning_practice
Bioinformatics-Specialization-Coursera
Bioinformatics Specialization Journey to the Frontier of Computational Biology. Master bioinformatics software and computational approaches in modern biology.
bioinformatics-workflows
minimal example implementations for bioinformatics workflow managers
EpiNano
Detection of RNA modifications from Oxford Nanopore direct RNA sequencing reads (Liu*, Begik* et al., Nature Comm 2019)
exomePeak
Analysis of RNA epitranscriptome sequencing data with affinity-based shotgun sequencing approach
Funm6AViewer
Identification and visualization of functional differential m6A methylation genes (FDmMGenes) and single base DmM sites.
merip_reanalysis_scripts
Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq
AzkaSaleem's Repositories
AzkaSaleem/exomePeak
Analysis of RNA epitranscriptome sequencing data with affinity-based shotgun sequencing approach
AzkaSaleem/Funm6AViewer
Identification and visualization of functional differential m6A methylation genes (FDmMGenes) and single base DmM sites.
AzkaSaleem/merip_reanalysis_scripts
Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq
AzkaSaleem/ads1-notebooks
Copies of notebooks used in the practical sessions for Algorithms for DNA Sequencing
AzkaSaleem/DIMER
Dimer is a Python-based package for testing differential methylation in m6A sequencing data.
AzkaSaleem/iMRM
Post-transcriptional modification site recognition
AzkaSaleem/m6A-seq_analysis_workflow
A pipeline to process m6A-seq data and down stream analysis.
AzkaSaleem/m6A_Evolution
A bioinformatics pipeline for the evolution analysis of m6A in plants
AzkaSaleem/NGS-analysis
二代测序数据分析
AzkaSaleem/RASflow
RNA-Seq analysis workflow
AzkaSaleem/RNAseq-workflow
A repository for setting up a RNAseq workflow
AzkaSaleem/Shafik_et_al_codes-m6a
AzkaSaleem/STAR-protocol-Sanchis.et.al