Pinned Repositories
BamCoverage
BamCoverage: A efficient software tools to calculate every site depth of genome based bam files
BamDeal
BamDeal: a comprehensive toolkit for bam manipulation
BamSplit
A efficient software tools to split Bam form all chromosome together to each chr one bam
FxTools
FxTools: a comprehensive toolkit for FASTA and FASTQ file manipulation
LDBlockShow
LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files
PopLDdecay
PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files
RectChr
Multi-level visualization of genomic statistical variables on rectangular chromosomes
Reseqtools
A Toolkit for analyzing next-generation DNA Re-Sequencing data
RRSelection
RRSelection: A linkage disequilibrium method to detect selection region across population VCF
VCF2Dis
VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Format
hewm2008@bgi's Repositories
BGI-shenzhen/PopLDdecay
PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files
BGI-shenzhen/LDBlockShow
LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files
BGI-shenzhen/Reseqtools
A Toolkit for analyzing next-generation DNA Re-Sequencing data
BGI-shenzhen/RectChr
Multi-level visualization of genomic statistical variables on rectangular chromosomes
BGI-shenzhen/VCF2Dis
VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Format
BGI-shenzhen/BamDeal
BamDeal: a comprehensive toolkit for bam manipulation
BGI-shenzhen/FxTools
FxTools: a comprehensive toolkit for FASTA and FASTQ file manipulation
BGI-shenzhen/RRSelection
RRSelection: A linkage disequilibrium method to detect selection region across population VCF
BGI-shenzhen/BamCoverage
BamCoverage: A efficient software tools to calculate every site depth of genome based bam files
BGI-shenzhen/BamSplit
A efficient software tools to split Bam form all chromosome together to each chr one bam
BGI-shenzhen/gcaPDA
gamete cell assisted chromosome-scale phased diploid assembler
BGI-shenzhen/soap2bam
soap2bam: A efficient software tools to convert soap to bam format
BGI-shenzhen/SoapNewCov
SoapNewCov: A efficient software tools to Calculate site depth of genome based soap
BGI-shenzhen/fqcheck
fqcheck: A new simple and efficient software to stat base and quality distribution of fq file