/jaffelab

R package with commonly used functions by the Jaffe lab

Primary LanguageR

jaffelab

Travis-CI build status Lifecycle: maturing Codecov test coverage DOI

This package contains custom functions that are frequently used by the Jaffe lab. Please check the package documentation website for more information.

Installation instructions

Get the latest stable R release from CRAN. Then install jaffelab using the following code:

## If needed:
if (!requireNamespace("remotes", quietly = TRUE))
   install.packages("remotes")

## Install with:
remotes::install_github('LieberInstitute/jaffelab')

Citation

Below is the citation output from using citation('jaffelab') in R. Please run this yourself to check for any updates on how to cite jaffelab.

citation('jaffelab')
#> 
#> To cite package 'jaffelab' in publications use:
#> 
#>   Leonardo Collado-Torres, Andrew E. Jaffe and Emily E. Burke
#>   (2019). jaffelab: Commonly used functions by the Jaffe lab. R
#>   package version 0.99.29.
#>   https://github.com/LieberInstitute/jaffelab
#> 
#> A BibTeX entry for LaTeX users is
#> 
#>   @Manual{,
#>     title = {jaffelab: Commonly used functions by the Jaffe lab},
#>     author = {Leonardo Collado-Torres and Andrew E. Jaffe and Emily E. Burke},
#>     year = {2019},
#>     note = {R package version 0.99.29},
#>     url = {https://github.com/LieberInstitute/jaffelab},
#>   }

Testing

Testing on Bioc-devel is feasible thanks to R Travis.