Dr. Barski Laboratory
The Barski Lab researches epigenomics with a primary focus on the immune system. Our main research projects are designed to investigate epigenomic regulations
Cincinnati, US
Pinned Repositories
biowardrobe
BioWardrobe: an integrated platform for analysis of epigenomics and transcriptomics data
biowardrobe-airflow-analysis
BioWardrobe's backend rewritten for Apache Airflow.
biowardrobe-ng
BioWardrobe-NG
cwl-airflow
Python package to extend Airflow functionality with CWL1.1 support
cwl-airflow-cli
Python package to add and check the status of the submitted to Airflow jobs
ga4gh_challenge
Workflow for GA4GH/DREAM challenge (phase 2)
incubator-airflow
Apache Airflow (Incubating)
Lenti-STARR
sc-seq-analysis
CWL toolkit for single-cell sequencing data analysis
workflows
Community maintained workflows & tools (with examples)
Dr. Barski Laboratory's Repositories
Barski-lab/cwl-airflow
Python package to extend Airflow functionality with CWL1.1 support
Barski-lab/workflows
Community maintained workflows & tools (with examples)
Barski-lab/biowardrobe
BioWardrobe: an integrated platform for analysis of epigenomics and transcriptomics data
Barski-lab/biowardrobe-airflow-analysis
BioWardrobe's backend rewritten for Apache Airflow.
Barski-lab/sc-seq-analysis
CWL toolkit for single-cell sequencing data analysis
Barski-lab/ga4gh_challenge
Workflow for GA4GH/DREAM challenge (phase 2)
Barski-lab/biowardrobe-ng
BioWardrobe-NG
Barski-lab/cwl-airflow-cli
Python package to add and check the status of the submitted to Airflow jobs
Barski-lab/incubator-airflow
Apache Airflow (Incubating)
Barski-lab/biowardrobe-airflow-plugins
Plugins for BioWardrobe Analysis
Barski-lab/Lenti-STARR
Barski-lab/ROSE
Fork from ROSE (https://bitbucket.org/young_computation/rose/src/master/annotation/)
Barski-lab/workflows_test
Conformance test for Barski-lab/workflows
Barski-lab/ALEA_CWL_workflow
Barski-lab/allele-project
Projects allele specific alignments to reference genome
Barski-lab/atdp
BioWardrobe ATDP
Barski-lab/barski-lab.github.io
Barski-lab/bharath90-meteorgeo
Barski-lab/biowardrobe-airflow-advanced
Advanced analysis from BioWardrobe
Barski-lab/biowardrobe-analysis
BioWardrobe basic and advanced analysis
Barski-lab/biowardrobe-ui
transition frontend ui for biowardrobe
Barski-lab/geep
INPUT: sam, bam, gff, gtf, tab-delimited table annotations
Barski-lab/get-certificate
Get certificate from https://letsencrypt.org/
Barski-lab/iaintersect
BioWardrobe Iaintersect.
Barski-lab/meteorgeo
Barski-lab/refgene-sort
Utility to sort refGene tab-delimited annotation files from Genome Browser (DB dumps)
Barski-lab/SatScript
Original SatScript.py from default R scripts (BioWardrobe)
Barski-lab/sra-interface
Barski-lab/visualization_plugins
Set of utilities for interactive data visualization
Barski-lab/workflows-datirium
CWL based Bioinformatics Workflows