Pinned Repositories
2019-04-03-ttt-stockholm
The Carpentries Train the Trainer, 03-04 April, 2019, Stockholm, Sweden
Benfeitas.github.io
Code for personal repo
benfeitas_binder
bioinformatics_resources
Useful bioinformatic resources
Carpentries-create-workshop
chipseq
ChIP-seq peak-calling, QC and differential analysis pipeline.
clustergrammer-widget
The Clustergrammer interactive Jupyter notebook widget
excelerate-scRNAseq
Single RNA-seq data analysis with R (Finland, May, 2019)
harmonizome
Source code for the Harmonizome
HiC_tools
A collection of tools for Hi-C data analysis
Benfeitas's Repositories
Benfeitas/excelerate-scRNAseq
Single RNA-seq data analysis with R (Finland, May, 2019)
Benfeitas/2019-04-03-ttt-stockholm
The Carpentries Train the Trainer, 03-04 April, 2019, Stockholm, Sweden
Benfeitas/Benfeitas.github.io
Code for personal repo
Benfeitas/benfeitas_binder
Benfeitas/bioinformatics_resources
Useful bioinformatic resources
Benfeitas/Carpentries-create-workshop
Benfeitas/chipseq
ChIP-seq peak-calling, QC and differential analysis pipeline.
Benfeitas/clustergrammer-widget
The Clustergrammer interactive Jupyter notebook widget
Benfeitas/harmonizome
Source code for the Harmonizome
Benfeitas/HiC_tools
A collection of tools for Hi-C data analysis
Benfeitas/ipypublish
A workflow for creating and editing publication ready scientific reports and presentations, from one or more Jupyter Notebooks, without leaving the browser!
Benfeitas/Jupyter_notebook_testing
Benfeitas/mixOmics
Master and devel repo for mixOmics on BioC
Benfeitas/phd2018
Repository for PhD Course 2018: Systems Biology of Human Metabolism and Gut Microbiome
Benfeitas/Project_S3_new_rep
moved many files and foud it easier to make a new rep
Benfeitas/ProjectDrugRepurposing
Benfeitas/python-ecology-lesson
:page_with_curl: Data Carpentry Python lessons on ecology.
Benfeitas/theme_testing
Benfeitas/TPMCalculator
TPMCalculator quantifies mRNA abundance directly from the alignments by parsing BAM files