This a Julia interface to the Dalliance genome browser. It's designed to allow full featured visualization of genomic data within the comfort of a Jupyter notebook.
It works by converting Bio.jl structures to the efficient indexed formats BigBed and BigWig, which are kept in memory and served as needed to the browser front-end.
Install GenomeBrowsers from the Julia REPL:
using Pkg
add("GenomeBrowsers")
#Pkg.add("GenomeBrowsers") for julia prior to v0.7GenomeBrowsers is tested against, julia v0.6 and 0.7-dev on Linux, OSX,
and Windows.
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We appreciate contributions from users including reporting bugs, fixing issues, improving performance and adding new features.
Take a look at the CONTRIBUTING file provided with this package for detailed contributor and maintainer guidelines.
If you have a question about contributing or using this package, come on over and chat to us on Discord, or you can try the Bio category of the Julia discourse site.