The Blue Brain Project

Open Source Software produced and used by the Blue Brain Project

Geneva, Switzerland

Pinned Repositories

BioExplorer
The Blue Brain BioExplorer (BBBE) is a tool for data visualization experts and scientists to extract and analyze scientific data from visualization and interactive exploration
Language:C++65 3 211
BluePyOpt
Blue Brain Python Optimisation Library
Language:Python216 18 86101
Brayns
Visualizer for large-scale and interactive ray-tracing of neurons
Language:C++301 21 9148
CoreNeuron
Simulator optimized for large scale neural network simulations.
Language:C++141 22 24241
eFEL
Electrophys Feature Extraction Library
Language:Python73 17 9941
HighFive
HighFive - Header-only C++ HDF5 interface
Language:C++715 21 378161
NeuroM
Neuronal Morphology Analysis Tool
Language:Python108 26 27958
NeuroMorphoVis
A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing digital reconstructions of neuronal morphology skeletons extracted from microscopy stacks.
Language:Python138 9 20628
nexus
Blue Brain Nexus - A knowledge graph for data-driven science
Language:Scala290 26 3.2k78
nmodl
Code Generation Framework For NEURON MODeling Language
Language:C++58 11 50416

The Blue Brain Project's Repositories

BlueBrain/bluima
Natural Language Processing Toolkit for Neuroscience
Language:Java27 10 115
BlueBrain/SSCxEModelExamples
Language:Jupyter Notebook10 3 35
BlueBrain/OpenData
6 3 02
BlueBrain/ISC2017Paper
From Big Data to Big Displays: High-Performance Visualization at Blue Brain
Language:TeX2 13 01
BlueBrain/NeuroVR
Language:C#2 4 01
BlueBrain/atlas-quality-metrics
Language:Python11
BlueBrain/aws-puppet-bolt-configuration
Language:Puppet1 2 02
BlueBrain/cell-density-validation-configs
11
BlueBrain/check-pages
Language:Python1 1 01
BlueBrain/connectome-validation
Language:Jupyter Notebook11
BlueBrain/hippocampus-model-portal
Language:TypeScript1 4 31
BlueBrain/long-range-connectivity-configs
11
BlueBrain/molsys-cell-atlas
This repository provides overwrite and validation tests for the BBP cell atlas.
Language:Python1 2 01
BlueBrain/Molsys-Ion-Channel-Selector
Language:Python11
BlueBrain/molsys-metabolismndam
Language:Jupyter Notebook11
BlueBrain/molsys-multiscale-run-config-helper
Language:Python11
BlueBrain/Molsys-STP-Prediction
Language:Jupyter Notebook11
BlueBrain/neuron_reduce
Language:AGS Script1 1 01
BlueBrain/ngv-portal
Language:TypeScript1 3 161
BlueBrain/obi-saucelabs
Language:Python11
BlueBrain/PhyAnim
Language:C++11
BlueBrain/projectionizer
Projectionizer aims at sampling synapses with pre-synaptic axons coming from outer regions
Language:Python1 4 01
BlueBrain/reduced-resolution-connectome
Language:Python11
BlueBrain/s2f-recipe-adjustments
Language:Shell11
BlueBrain/s2f-yaml
11
BlueBrain/sscx-connectome-manipulations
Reproduction repository for applying connectome manipulations to a detailed model of the rat SSCx
Language:Jupyter Notebook1 0 01
BlueBrain/sscx-portal
The Somatosensory Cortex Data Explorer
Language:TypeScript1 6 1291
BlueBrain/veeone-spectacle
Language:TypeScript1 3 01
BlueBrain/veeone-veedrive
Language:Python11
BlueBrain/wm-connectivity-validation
Language:Jupyter Notebook11