C-G-L

albumentations

Fast image augmentation library and an easy-to-use wrapper around other libraries. Documentation: https://albumentations.ai/docs/ Paper about the library: https://www.mdpi.com/2078-2489/11/2/125

anystyle-cli

AnyStyle Command Line Interface

ayroles-chromium

dna-seq-gatk-variant-calling

This Snakemake pipeline implements the GATK best-practices workflow

fastq-dl

Download FASTQ files from SRA or ENA repositories.

l1ou

Detection of evolutionary shifts in Ornstein-Uhlenbeck models

LepTraits

patternize-examples

Examples to run the R package patternize

read_thermal.py

A small tool/lib to read temperatures and original photos from FLIR® thermal camera images.

Sample-distributions

Function to plot sample distributions with convex hull polygon (alpha shape)

C-G-L/anystyle-cli

AnyStyle Command Line Interface

C-G-L/ayroles-chromium

C-G-L/dna-seq-gatk-variant-calling

This Snakemake pipeline implements the GATK best-practices workflow

C-G-L/fastq-dl

Download FASTQ files from SRA or ENA repositories.

C-G-L/l1ou

Detection of evolutionary shifts in Ornstein-Uhlenbeck models

C-G-L/LepTraits

C-G-L/patternize-examples

Examples to run the R package patternize

C-G-L/read_thermal.py

A small tool/lib to read temperatures and original photos from FLIR® thermal camera images.

C-G-L/Sample-distributions

Function to plot sample distributions with convex hull polygon (alpha shape)

C-G-L/albumentations

Fast image augmentation library and an easy-to-use wrapper around other libraries. Documentation: https://albumentations.ai/docs/ Paper about the library: https://www.mdpi.com/2078-2489/11/2/125

C-G-L/C-G-L.github.io

Personal Website

C-G-L/borealis

An R package for common activities in an integrative biology lab

C-G-L/dl-course

Deep Learning with Catalyst

C-G-L/genomics-in-the-cloud

Source code and related materials for the O'Reilly book

C-G-L/haplotagging

Code and binaries related to processing haplotagging data

C-G-L/Longevity

Code for Longevity Project

C-G-L/Minnow_Segmented_Traits

Using trait segmentation to understand minnow trait evolution across an ecological gradient

C-G-L/Pararge_aegeria_morphometrics

C-G-L/TM3Seq-Pipeline

C-G-L/visual_preference_heurippa_linaresi

Analysis details for “Light environment influences mating behaviours during the early stages of divergence in tropical butterflies”

C-G-L/wrath

WRATH: WRapped Analysis of Tagged Haplotypes