/frc_hacking

frc_hacking

repo for the FRCurve hacking

FRC roadmap

  1. create parsers for metaquast/valet/etc output
  2. collect generic assembly stats
  3. filter contigs (default no, by size/coverage/gc content etc)
  4. output feature glossary
  5. output tsv/json (contig id, contig length, # features, feature type), optional: percent reference covered, percent total asm
  6. output assembly stats
  7. visualize tsv/json with ggplot2, plyr, plotly in R -> Andreas