CEGRcode/scriptmanager

Add new tools based on Perl script collection

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Implement new Java tools specified by the short Perl (and Python) script collection from @WilliamKMLai.

  • calculate_BED_ScoreRatio.pl
  • deduplicate_BED_coord_keep_highest_score.py
  • determine_closest_RefPoint_output_Both.pl
  • filter_BED_by_list_ColumnSelect.pl
  • filter_BED_by_string_ColumnSelect.pl
  • filter_BED_by_value_ColumnSelect.pl
  • shift_BED_center_v2.pl
  • sort_BED_by_Score_v2.pl
  • sum_Col_CDT.pl
  • sum_Row_CDT.pl
  • update_BED_coord.pl
  • update_BED_score_with_TAB_score.pl