CFisicaro

PeptoneBellinzona, CH

Pinned Repositories

MolecularNodes
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
Language:Python965 19 35894
bionemo-framework
BioNeMo Framework: For building and adapting AI models in drug discovery at scale
Language:Jupyter Notebook00
PyHDX
Derive ΔG for single residues from HDX-MS data
Language:Python0 0 00
ADOPT
ADOPT: intrinsic protein disorder prediction through deep bidirectional transformers
Language:Jupyter Notebook16 1 291
contrastive-finetuning-plms
Optimizing protein language models with Sentence Transformers - ADOPT2
Language:Python3 1 01
nerfax
An efficient method for the conversion from internal to Cartesian coordinates that utilizes the platform-agnostic JAX Python library.
Language:Jupyter Notebook15 1 34
pepkalc
Robust simulation software for the comprehensive evaluation of protein electrostatics in unfolded state.
Language:Python5 2 01
proteinmpnn_ddg
Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
Language:Python41 1 15
ProteoNeMo
Ongoing research training transformer models on proteome at scale
Language:Python5 1 41

CFisicaro/bionemo-framework
BioNeMo Framework: For building and adapting AI models in drug discovery at scale
Language:Jupyter Notebook00
CFisicaro/PyHDX
Derive ΔG for single residues from HDX-MS data
Language:Python0 0 00