PeptoneLtd/ADOPT

Issues

• onxxruntime _create_inference_session: ValueError

  #41 opened a year ago by klaasdewaele
  2

• module 'esm' has no attribute 'pretrained'

  #40 opened 2 years ago by agarrubio
  1

• Nonexistant folder in dockerfile

  #38 opened 2 years ago by oliverdutton
  2

• Fix ESM1v inference model input

  #37 opened 2 years ago by CFisicaro
  0

• Download of several databases when model type just esm1b

  #34 opened 3 years ago by oliverdutton
  1

• Add default options

  #33 opened 2 years ago by oliverdutton
  1

• Use ESM as submodule once ADOPT goes public

  #3 opened 3 years ago by CFisicaro
  1

• Change brmid in p_name

  #32 opened 3 years ago by CFisicaro
  0

• Train a model on chezod (1325 + 117)

  #31 opened 3 years ago by CFisicaro
  0

• @falkph please remove all the installation commands

  #30 opened 3 years ago by CFisicaro
  0

• Github action to update the adopt docker container after each release

  #27 opened 3 years ago by CFisicaro
  0

• Separate examples from scripts

  #24 opened 3 years ago by CFisicaro
  0

• Add stability plot

  #26 opened 3 years ago by CFisicaro
  0

• Standardise inference phase.

  #23 opened 3 years ago by CFisicaro
  0

• MSA extract script with GPU support

  #22 opened 3 years ago by CFisicaro
  0

• Include ESM-MSA pre trained model

  #2 opened 3 years ago by CFisicaro
  0

• Use argparse library in place of getopt library

  #9 opened 3 years ago by CFisicaro
  0

• Add notebooks description in README

  #18 opened 3 years ago by CFisicaro
  0

• Add scripts usage in README

  #16 opened 3 years ago by CFisicaro
  0

• Add jupyter notebooks tutorial

  #5 opened 3 years ago by CFisicaro
  0

• Add viz routines

  #4 opened 3 years ago by CFisicaro
  1

• Bad inference results

  #12 opened 3 years ago by CFisicaro
  0

• Web server integration

  #14 opened 3 years ago by CFisicaro
  0

• Create documentation

  #13 opened 3 years ago by CFisicaro
  0

• Add bash script for inference

  #8 opened 3 years ago by CFisicaro
  0

• Add bash script for training

  #7 opened 3 years ago by CFisicaro
  0

• Add CHANGELOG

  #6 opened 3 years ago by CFisicaro
  0

• Better README

  #1 opened 3 years ago by ktamiola
  1