Peptone

World's first, end-to-end Protein Engineering Operating System (PeOS).

London, United Kingdom

Pinned Repositories

ADOPT
ADOPT: intrinsic protein disorder prediction through deep bidirectional transformers
Language:Jupyter Notebook16 2 281
ColabDesign
Making Protein Design accessible to all via Google Colab!
Language:Python0 0 00
contrastive-finetuning-plms
Optimizing protein language models with Sentence Transformers - ADOPT2
Language:Python3 2 01
dspp-data
Database of Structural Propensities of Proteins (dSPP) raw data repository by Peptone Inc.
4 3 22
dspp-keras
Protein order and disorder data for Keras, Tensor Flow and Edward frameworks with automated update cycle made for continuous learning applications.
Language:Python169 14 1921
Machine-learning-for-proteins
Listing of papers about machine learning for proteins.
8 1 03
nerfax
An efficient method for the conversion from internal to Cartesian coordinates that utilizes the platform-agnostic JAX Python library.
Language:Jupyter Notebook15 1 34
pepkalc
Robust simulation software for the comprehensive evaluation of protein electrostatics in unfolded state.
Language:Python5 2 01
proteinmpnn_ddg
Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
Language:Python33 1 14
ProteoNeMo
Ongoing research training transformer models on proteome at scale
Language:Python5 1 41

PeptoneLtd/dspp-keras
Protein order and disorder data for Keras, Tensor Flow and Edward frameworks with automated update cycle made for continuous learning applications.
Language:Python169 14 1921
PeptoneLtd/proteinmpnn_ddg
Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
Language:Python33 1 14
PeptoneLtd/ADOPT
ADOPT: intrinsic protein disorder prediction through deep bidirectional transformers
Language:Jupyter Notebook16 2 281
PeptoneLtd/nerfax
An efficient method for the conversion from internal to Cartesian coordinates that utilizes the platform-agnostic JAX Python library.
Language:Jupyter Notebook15 1 34
PeptoneLtd/Machine-learning-for-proteins
Listing of papers about machine learning for proteins.
8 1 03
PeptoneLtd/pepkalc
Robust simulation software for the comprehensive evaluation of protein electrostatics in unfolded state.
Language:Python5 2 01
PeptoneLtd/ProteoNeMo
Ongoing research training transformer models on proteome at scale
Language:Python5 1 41
PeptoneLtd/dspp-data
Database of Structural Propensities of Proteins (dSPP) raw data repository by Peptone Inc.
4 3 22
PeptoneLtd/contrastive-finetuning-plms
Optimizing protein language models with Sentence Transformers - ADOPT2
Language:Python3 2 01
PeptoneLtd/ColabDesign
Making Protein Design accessible to all via Google Colab!
Language:Python0 0 00