CIDAR LAB

cidarlab.org

Pinned Repositories

3DuF
Interactive microfluidic design editor
Language:JavaScript72 14 20869
cello
Genetic circuit design automation
Language:Java808 79 38134
Cello-v2
Cello v2 is the continuation of the Cello genetic circuit design software.
Language:Java53 12 2615
Cello-v2-1-Core
Streamlined Cello Algorithm. Feed it Verilog and UCF from CIDARLAB/CELLO-UCF, and run celloAlgo.py in terminal to make genetic circuit designs locally on your machine.
Language:Python84
clotho3crud
Clotho
Language:Java107
DAFD
Language:Python15 11 17
fpSelection
Algorithms for the selection of fluorescent reporters.
Language:Java6 6 93
knox
Full stack application for creating, combining, and storing combinatorial genetic design spaces.
Language:JavaScript10 14 179
Neptune-iGEM-2016
Language:JavaScript11 14 5112
uDrop-Generation
Language:Python10 12 34

CIDAR LAB's Repositories

CIDARLAB/cello
Genetic circuit design automation
Language:Java808 79 38134
CIDARLAB/3DuF
Interactive microfluidic design editor
Language:JavaScript72 14 20869
CIDARLAB/DAFD
Language:Python15 11 17
CIDARLAB/knox
Full stack application for creating, combining, and storing combinatorial genetic design spaces.
Language:JavaScript10 14 179
CIDARLAB/Cello-v2-1-Core
Streamlined Cello Algorithm. Feed it Verilog and UCF from CIDARLAB/CELLO-UCF, and run celloAlgo.py in terminal to make genetic circuit designs locally on your machine.
Language:Python84
CIDARLAB/eugene-v2.0
v2.0 of the Eugene Language project [under development]
Language:Java5 14 93
CIDARLAB/Neptune
Language:JavaScript5 5 165
CIDARLAB/dafd-website
Language:Python3 7 01
CIDARLAB/neural-optimizer
Language:Python3 8 02
CIDARLAB/pyLFR
Language:Python3 6 263
CIDARLAB/Peripheral-Manager
Talk to USB devices from the browser
Language:Python2 7 32
CIDARLAB/pigeon
Language:Python2 7 74
CIDARLAB/pyparchmint
pyparchmint is the defacto object library for describing microfluidic device architectures. It contains the base datastructures for provisioning physical layout descriptions of microfluidic devices.
Language:Python2 5 116
CIDARLAB/Cello-v2-webapp-gui
This is the source for the GUI that supports the Cello v2 webapp. This repository exists only for development purposes. If you want to use the GUI, either visit http://cellocad.org to interact with a running instance, or https://github.com/CIDARLAB/Cello-v2-webapp for instructions on running a Docker image or building the webapp from source.
Language:JavaScript1 3 102
CIDARLAB/constellation-js
Library for combinatorially specifying, constraining, and exploring genetic design spaces.
Language:JavaScript1
CIDARLAB/eugenecad
The web site of the Eugene ecosystem
Language:HTML1 17 01
CIDARLAB/genetic-circuit-partitioning
Partitioning a randomly sythesized graph, or
Language:Python1 6 0
CIDARLAB/goldbar-generator
Tool for GOLDBAR Generation using Rule Templates
Language:Python1 2 0
CIDARLAB/pyMINT
Language:Python1 4 52
CIDARLAB/UCFormatter
modify and visualize UCF files containing genetic part specifications
Language:Python1 4 01
CIDARLAB/DAFD_Metrics
Language:Jupyter Notebook4 0
CIDARLAB/drop2image
Language:HTML4 0
CIDARLAB/genetic-circuit-partitioning-new
Language:Python1 0
CIDARLAB/Microfluidics-Benchmarks
Consolidated Repo of Test Cases and Benchmarks
Language:Mint4 01
CIDARLAB/mint-parchmint-scripts
Language:Python1 0
CIDARLAB/Oriole
Language:Verilog0 0
CIDARLAB/pycello-v2
Python classes for Cello v2 input and output formats, namely the netlist and the UCF.
Language:Python2 01
CIDARLAB/pyFluigi
Language:C++5 15
CIDARLAB/SS-Analyzer
Language:Python9 0
CIDARLAB/Vespa-Algorithm
Language:Python1 0